* using log directory 'd:/Rcompile/CRANpkg/local/2.8/DPpackage.Rcheck' * using R version 2.8.0 (2008-10-20) * using session charset: ISO8859-1 * checking for file 'DPpackage/DESCRIPTION' ... OK * this is package 'DPpackage' version '1.0-6' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'DPpackage' can be installed ... ERROR Installation failed. The installation logfile: Using auto-selected zip options 'DPpackage-ZIPDATA=zip DPpackage-HELP=ziponly' ---------- Making package DPpackage ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making HDPdensity.d from HDPdensity.c making ToolsBayes.d from ToolsBayes.c making ToolsCCdflib.d from ToolsCCdflib.c making ToolsCMatrix.d from ToolsCMatrix.c making ToolsCom.d from ToolsCom.c making ToolsFortif.d from ToolsFortif.c making ToolsInterface.d from ToolsInterface.c making ToolsIpmpar.d from ToolsIpmpar.c making ToolsMess.d from ToolsMess.c making ToolsNrutil.d from ToolsNrutil.c making ToolsPredictN.d from ToolsPredictN.c making ToolsRand-nr.d from ToolsRand-nr.c making ToolsRand.d from ToolsRand.c making ToolsRanlib.d from ToolsRanlib.c making ToolsRegr.d from ToolsRegr.c making ToolsRfun.d from ToolsRfun.c making ToolsUnixrep.d from ToolsUnixrep.c making ToolsVector.d from ToolsVector.c gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c HDPdensity.c -o HDPdensity.o In file included from HDPdensity.c:39: HDPdensity.h:70:1: warning: "/*" within comment HDPdensity.c:50:1: warning: "/*" within comment HDPdensity.c:51:1: warning: "/*" within comment HDPdensity.c:52:1: warning: "/*" within comment HDPdensity.c: In function 'init': HDPdensity.c:106: warning: unused variable 'ni' HDPdensity.c:106: warning: unused variable 'pa' HDPdensity.c:106: warning: unused variable 'currpa' HDPdensity.c:106: warning: unused variable 'k' HDPdensity.c:182:1: warning: "/*" within comment HDPdensity.c:183:1: warning: "/*" within comment HDPdensity.c:184:1: warning: "/*" within comment HDPdensity.c:206:1: warning: "/*" within comment HDPdensity.c:225:1: warning: "/*" within comment HDPdensity.c:230:1: warning: "/*" within comment HDPdensity.c:240:1: warning: "/*" within comment HDPdensity.c:250:1: warning: "/*" within comment HDPdensity.c:299:1: warning: "/*" within comment HDPdensity.c:339:1: warning: "/*" within comment HDPdensity.c:376:1: warning: "/*" within comment HDPdensity.c: In function 'mdp_init': HDPdensity.c:234: warning: unused variable 'j' HDPdensity.c:399:1: warning: "/*" within comment HDPdensity.c:439:1: warning: "/*" within comment HDPdensity.c: In function 'mdp_gibbs': HDPdensity.c:443: warning: unused variable 'start' HDPdensity.c:470:1: warning: "/*" within comment HDPdensity.c:474:1: warning: "/*" within comment HDPdensity.c: In function 'mdp_sampleconfig': HDPdensity.c:488: warning: unused variable 'u' HDPdensity.c:486: warning: unused variable 'k' HDPdensity.c:540:1: warning: "/*" within comment HDPdensity.c:564:1: warning: "/*" within comment HDPdensity.c:623:1: warning: "/*" within comment HDPdensity.c:656:1: warning: "/*" within comment HDPdensity.c:690:1: warning: "/*" within comment HDPdensity.c:705:1: warning: "/*" within comment HDPdensity.c: In function 'mdp_setupmu': HDPdensity.c:730: warning: unused variable 'V_inv' HDPdensity.c:770:1: warning: "/*" within comment HDPdensity.c:817:1: warning: "/*" within comment HDPdensity.c:818:1: warning: "/*" within comment HDPdensity.c:850:1: warning: "/*" within comment HDPdensity.c:901:1: warning: "/*" within comment HDPdensity.c: In function 'sample_eps': HDPdensity.c:949: warning: unused variable 'u' HDPdensity.c:1084:1: warning: "/*" within comment gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsBayes.c -o ToolsBayes.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsCCdflib.c -o ToolsCCdflib.o ToolsCCdflib.c: In function 'cdfbin': ToolsCCdflib.c:1889: warning: suggest parentheses around && within || ToolsCCdflib.c: In function 'cdfgam': ToolsCCdflib.c:3551: warning: suggest parentheses around && within || ToolsCCdflib.c: In function 'E0000': ToolsCCdflib.c:6410: warning: suggest parentheses around && within || ToolsCCdflib.c:6434: warning: suggest parentheses around && within || ToolsCCdflib.c:6475: warning: suggest parentheses around && within || ToolsCCdflib.c: In function 'E0001': ToolsCCdflib.c:6877: warning: suggest parentheses around && within || gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsCMatrix.c -o ToolsCMatrix.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsCom.c -o ToolsCom.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsFortif.c -o ToolsFortif.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsInterface.c -o ToolsInterface.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsIpmpar.c -o ToolsIpmpar.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsMess.c -o ToolsMess.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsNrutil.c -o ToolsNrutil.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsPredictN.c -o ToolsPredictN.o In file included from ToolsPredictN.c:20: HDPdensity.h:70:1: warning: "/*" within comment ToolsPredictN.c: In function 'predictN': ToolsPredictN.c:242: warning: format '%5.3f' expects type 'double', but argument 3 has type 'int' ToolsPredictN.c:105: warning: unused variable 'tmpfile' ToolsPredictN.c:103: warning: unused variable 'eps' ToolsPredictN.c:102: warning: unused variable 'lp' ToolsPredictN.c:102: warning: unused variable 's' ToolsPredictN.c:102: warning: unused variable 'm' ToolsPredictN.c:97: warning: unused variable 'h' ToolsPredictN.c:97: warning: unused variable 'tlo' ToolsPredictN.c:97: warning: unused variable 'k' ToolsPredictN.c: In function 'init_predict': ToolsPredictN.c:266: warning: unused variable 'to' ToolsPredictN.c:266: warning: unused variable 'from' ToolsPredictN.c:264: warning: unused variable 'j' ToolsPredictN.c:264: warning: unused variable 'i' gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsRand-nr.c -o ToolsRand-nr.o ToolsRand-nr.c:5:1: warning: "/*" within comment ToolsRand-nr.c:65:1: warning: "/*" within comment gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsRand.c -o ToolsRand.o In file included from ToolsRand.c:60: ToolsMathconst.h:23:1: warning: "M_PI" redefined In file included from ToolsRand.c:52: d:\compiler\gcc\bin\../lib/gcc/mingw32/4.2.1-sjlj/../../../../include/math.h:58:1: warning: this is the location of the previous definition ToolsRand.c:77: warning: ignoring #pragma warning ToolsRand.c: In function 'pdf_norm_trunc': ToolsRand.c:380: warning: unused variable 'u' ToolsRand.c: At top level: ToolsCCdflib.h:47: warning: 'E0000' declared 'static' but never defined ToolsCCdflib.h:54: warning: 'E0001' declared 'static' but never defined gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsRanlib.c -o ToolsRanlib.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsRegr.c -o ToolsRegr.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsRfun.c -o ToolsRfun.o gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsUnixrep.c -o ToolsUnixrep.o In file included from ToolsUnixrep.c:31: ToolsMathconst.h:23:1: warning: "M_PI" redefined In file included from ToolsUnixrep.c:27: d:\compiler\gcc\bin\../lib/gcc/mingw32/4.2.1-sjlj/../../../../include/math.h:58:1: warning: this is the location of the previous definition gcc -std=gnu99 -Id:/Rcompile/recent/R-28~1.0/include -O3 -Wall -c ToolsVector.c -o ToolsVector.o gfortran -O3 -c BDPdensity.f -o BDPdensity.o gfortran -O3 -c CSDPbinaryl.f -o CSDPbinaryl.o gfortran -O3 -c DDPrasch.f -o DDPrasch.o gfortran -O3 -c DPMglmmgam.f -o DPMglmmgam.o gfortran -O3 -c DPMglmmlogit.f -o DPMglmmlogit.o gfortran -O3 -c DPMglmmpois.f -o DPMglmmpois.o gfortran -O3 -c DPMglmmprob.f -o DPMglmmprob.o gfortran -O3 -c DPMlm.f -o DPMlm.o gfortran -O3 -c DPMlmm.f -o DPMlmm.o gfortran -O3 -c DPMmeta.f -o DPMmeta.o gfortran -O3 -c DPMolmmp.f -o DPMolmmp.o gfortran -O3 -c DPbinaryc.f -o DPbinaryc.o gfortran -O3 -c DPbinaryl.f -o DPbinaryl.o gfortran -O3 -c DPbinaryp.f -o DPbinaryp.o gfortran -O3 -c DPbivdensityg.f -o DPbivdensityg.o gfortran -O3 -c DPbivdensityn.f -o DPbivdensityn.o gfortran -O3 -c DPdensityg.f -o DPdensityg.o gfortran -O3 -c DPdensityn.f -o DPdensityn.o gfortran -O3 -c DPdensityreg.f -o DPdensityreg.o gfortran -O3 -c DPglmmgam.f -o DPglmmgam.o gfortran -O3 -c DPglmmlogit.f -o DPglmmlogit.o gfortran -O3 -c DPglmmlogita.f -o DPglmmlogita.o gfortran -O3 -c DPglmmpois.f -o DPglmmpois.o gfortran -O3 -c DPglmmprob.f -o DPglmmprob.o gfortran -O3 -c DPlmm.f -o DPlmm.o gfortran -O3 -c DPmeta.f -o DPmeta.o gfortran -O3 -c DPmultmeta.f -o DPmultmeta.o gfortran -O3 -c DPolmmp.f -o DPolmmp.o gfortran -O3 -c DPrasch.f -o DPrasch.o gfortran -O3 -c DPraschpoisson.f -o DPraschpoisson.o gfortran -O3 -c DPsurvint.f -o DPsurvint.o gfortran -O3 -c FPTbinaryl.f -o FPTbinaryl.o gfortran -O3 -c FPTrasch.f -o FPTrasch.o gfortran -O3 -c FPTraschpoisson.f -o FPTraschpoisson.o gfortran -O3 -c LDDPdensity.f -o LDDPdensity.o gfortran -O3 -c PSgamgam.f -o PSgamgam.o gfortran -O3 -c PSgamgauss.f -o PSgamgauss.o gfortran -O3 -c PSgamlogit.f -o PSgamlogit.o gfortran -O3 -c PSgampois.f -o PSgampois.o gfortran -O3 -c PSgamprob.f -o PSgamprob.o gfortran -O3 -c PTlm.f -o PTlm.o gfortran -O3 -c PTlmp.f -o PTlmp.o gfortran -O3 -c PTmdensity.f -o PTmdensity.o gfortran -O3 -c PTmdensityp.f -o PTmdensityp.o gfortran -O3 -c PTmeta.f -o PTmeta.o gfortran -O3 -c PTsurv.f -o PTsurv.o gfortran -O3 -c PTudensity.f -o PTudensity.o gfortran -O3 -c PTudensityp.f -o PTudensityp.o gfortran -O3 -c Pbinary.f -o Pbinary.o gfortran -O3 -c TDPdensity.f -o TDPdensity.o gfortran -O3 -c TDPdensitypl.f -o TDPdensitypl.o gfortran -O3 -c ToolsARS.f -o ToolsARS.o gfortran -O3 -c ToolsBDP.f -o ToolsBDP.o gfortran -O3 -c ToolsCdflib.f -o ToolsCdflib.o gfortran -O3 -c ToolsDDP.f -o ToolsDDP.o gfortran -O3 -c ToolsDP.f -o ToolsDP.o gfortran -O3 -c ToolsDPM.f -o ToolsDPM.o gfortran -O3 -c ToolsDistributions.f -o ToolsDistributions.o gfortran -O3 -c ToolsHMM.f -o ToolsHMM.o gfortran -O3 -c ToolsIntegrate.f -o ToolsIntegrate.o gfortran -O3 -c ToolsMatrix.f -o ToolsMatrix.o gfortran -O3 -c ToolsPT.f -o ToolsPT.o gfortran -O3 -c ToolsPolynomials.f -o ToolsPolynomials.o gfortran -O3 -c ToolsRandlib.f -o ToolsRandlib.o gfortran -O3 -c ToolsRnumbers.f -o ToolsRnumbers.o gfortran -O3 -c ToolsSB.f -o ToolsSB.o gfortran -O3 -c ToolsSlice.f -o ToolsSlice.o gfortran -O3 -c ToolsSparseMatrix.f -o ToolsSparseMatrix.o gfortran -O3 -c ToolsSplines.f -o ToolsSplines.o gfortran -O3 -c ToolsStat.f -o ToolsStat.o gfortran -O3 -c ToolsSweep.f -o ToolsSweep.o gfortran -O3 -c ToolsTDP.f -o ToolsTDP.o windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I d:/Rcompile/recent/R-28~1.0/include -i DPpackage_res.rc -o DPpackage_res.o gcc -std=gnu99 -shared -s -o DPpackage.dll DPpackage.def HDPdensity.o ToolsBayes.o ToolsCCdflib.o ToolsCMatrix.o ToolsCom.o ToolsFortif.o ToolsInterface.o ToolsIpmpar.o ToolsMess.o ToolsNrutil.o ToolsPredictN.o ToolsRand-nr.o ToolsRand.o ToolsRanlib.o ToolsRegr.o ToolsRfun.o ToolsUnixrep.o ToolsVector.o BDPdensity.o CSDPbinaryl.o DDPrasch.o DPMglmmgam.o DPMglmmlogit.o DPMglmmpois.o DPMglmmprob.o DPMlm.o DPMlmm.o DPMmeta.o DPMolmmp.o DPbinaryc.o DPbinaryl.o DPbinaryp.o DPbivdensityg.o DPbivdensityn.o DPdensityg.o DPdensityn.o DPdensityreg.o DPglmmgam.o DPglmmlogit.o DPglmmlogita.o DPglmmpois.o DPglmmprob.o DPlmm.o DPmeta.o DPmultmeta.o DPolmmp.o DPrasch.o DPraschpoisson.o DPsurvint.o FPTbinaryl.o FPTrasch.o FPTraschpoisson.o LDDPdensity.o PSgamgam.o PSgamgauss.o PSgamlogit.o PSgampois.o PSgamprob.o PTlm.o PTlmp.o PTmdensity.o PTmdensityp.o PTmeta.o PTsurv.o PTudensity.o PTudensityp.o Pbinary.o TDPdensity.o TDPdensitypl.o ToolsARS.o ToolsBDP.o ToolsCdflib.o ToolsDDP.o ToolsDP.o ToolsDPM.o ToolsDistributions.o ToolsHMM.o ToolsIntegrate.o ToolsMatrix.o ToolsPT.o ToolsPolynomials.o ToolsRandlib.o ToolsRnumbers.o ToolsSB.o ToolsSlice.o ToolsSparseMatrix.o ToolsSplines.o ToolsStat.o ToolsSweep.o ToolsTDP.o DPpackage_res.o -Ld:/Rcompile/recent/R-28~1.0/bin -Ld:/Rcompile/recent/R-28~1.0/bin -lRlapack -Ld:/Rcompile/recent/R-28~1.0/bin -lRblas -lgfortran -lm -lgfortran -lR ToolsFortif.o:ToolsFortif.c:(.text+0x68): undefined reference to `DSYEV@44' ToolsFortif.o:ToolsFortif.c:(.text+0xd3): undefined reference to `DTRTRI@32' ToolsFortif.o:ToolsFortif.c:(.text+0x126): undefined reference to `DPOTRI@24' ToolsFortif.o:ToolsFortif.c:(.text+0x176): undefined reference to `DPOTRF@24' collect2: ld returned 1 exit status make[3]: *** [DPpackage.dll] Error 1 make[2]: *** [srcDynlib] Error 2 make[1]: *** [all] Error 2 make: *** [pkg-DPpackage] Error 2 *** Installation of DPpackage failed *** Removing 'd:/Rcompile/CRANpkg/lib/2.8/DPpackage'